CDS

Accession Number TCMCG042C72160
gbkey CDS
Protein Id XP_016504296.1
Location complement(join(166609..166625,168175..168502))
Gene LOC107822281
GeneID 107822281
Organism Nicotiana tabacum

Protein

Length 114aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319578
db_source XM_016648810.1
Definition PREDICTED: E3 ubiquitin ligase complex SCF subunit sconC-like [Nicotiana tabacum]

EGGNOG-MAPPER Annotation

COG_category O
Description modification-dependent protein catabolic process
KEGG_TC -
KEGG_Module M00379        [VIEW IN KEGG]
M00380        [VIEW IN KEGG]
M00381        [VIEW IN KEGG]
M00382        [VIEW IN KEGG]
M00387        [VIEW IN KEGG]
M00407        [VIEW IN KEGG]
M00411        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K03094        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04110        [VIEW IN KEGG]
ko04111        [VIEW IN KEGG]
ko04114        [VIEW IN KEGG]
ko04120        [VIEW IN KEGG]
ko04141        [VIEW IN KEGG]
ko04310        [VIEW IN KEGG]
ko04341        [VIEW IN KEGG]
ko04350        [VIEW IN KEGG]
ko04710        [VIEW IN KEGG]
ko05168        [VIEW IN KEGG]
ko05200        [VIEW IN KEGG]
map04110        [VIEW IN KEGG]
map04111        [VIEW IN KEGG]
map04114        [VIEW IN KEGG]
map04120        [VIEW IN KEGG]
map04141        [VIEW IN KEGG]
map04310        [VIEW IN KEGG]
map04341        [VIEW IN KEGG]
map04350        [VIEW IN KEGG]
map04710        [VIEW IN KEGG]
map05168        [VIEW IN KEGG]
map05200        [VIEW IN KEGG]
GOs GO:0000151        [VIEW IN EMBL-EBI]
GO:0002164        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008283        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009792        [VIEW IN EMBL-EBI]
GO:0009886        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009968        [VIEW IN EMBL-EBI]
GO:0010171        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010648        [VIEW IN EMBL-EBI]
GO:0010941        [VIEW IN EMBL-EBI]
GO:0019005        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023057        [VIEW IN EMBL-EBI]
GO:0031461        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0040032        [VIEW IN EMBL-EBI]
GO:0042981        [VIEW IN EMBL-EBI]
GO:0043066        [VIEW IN EMBL-EBI]
GO:0043067        [VIEW IN EMBL-EBI]
GO:0043069        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0060548        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0080135        [VIEW IN EMBL-EBI]
GO:1902229        [VIEW IN EMBL-EBI]
GO:1902230        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902531        [VIEW IN EMBL-EBI]
GO:1902532        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]
GO:2001020        [VIEW IN EMBL-EBI]
GO:2001021        [VIEW IN EMBL-EBI]
GO:2001233        [VIEW IN EMBL-EBI]
GO:2001234        [VIEW IN EMBL-EBI]
GO:2001242        [VIEW IN EMBL-EBI]
GO:2001243        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTTTTCATCTAAGGCATCCTTCCTAGTCAAGATCATCGAGTACCTCAAGAAGCATGCAGAAATCAAGGGTTCAGACGAAGAAGAAATCAAGAAAACCAAAATCAAGGACTTCGATAAGGAATTCATTAGCGTTAAGATGCAAAAACTCTTCAATATCATATTGGTTGCAAATTTCCTTGACATTAAGCCTTTGCTCGATCTTTGTGCTCAGGCTATTGCTGACAAGATCAAGAACAAGTCGCATGTGGTTGTTCGACAAAATTTCAATGTTCAATGTGATTATACTCGAGAGGAAGAAGATGTCGTTCGGAAAGAAAATGAATGGGGGCCGGCTGGAACCTAA
Protein:  
MFSSKASFLVKIIEYLKKHAEIKGSDEEEIKKTKIKDFDKEFISVKMQKLFNIILVANFLDIKPLLDLCAQAIADKIKNKSHVVVRQNFNVQCDYTREEEDVVRKENEWGPAGT